Slovenia belongs to the EU Member States with a lower level of specialization in agriculture. This is reflected in the number of specialized farms and the surface area of agricultural land treated by these holdings. Specialized farms in Slovenia generate a smaller share of standard output than the average in the European Union, which indicates that the processes of concentration and specialization of agricultural production in Slovenia is slower than in European Union.

In 2022, agriculture accounted for 97.5% of total ammonia emissions. From 1990 to 2023, ammonia emissions in Slovenian agriculture decreased by 31.8% and by 15.6% since 2005. Slovenian agriculture is achieving the overall emissions target set out in the NEC Directive (a gradual reduction of at least 15% by 2030 compared to 2005).

Greenhouse gas emissions from agriculture, mainly methane and nitrous oxide, decreased by 16.3% from 1986 to 2022. The largest declines occurred in pig and cattle production and in fertilizer application to agricultural crops. The rapid decline in emissions was typical of the early years of this period until 2013. From 2013 to 2016, emissions increased. They were steady between 2016 and 2021 and decreased in 2022.

The total number of varieties listed in the National List of Varieties for cereals, corn, and potatoes has decreased since 2011, while the number of oilseed varieties has steadily increased over the same period, mainly due to domestic varieties registered as conservation varieties and the registration of a larger number of foreign sunflower hybrids. In other crops the number has remained at the similar level. For rye and oats, the proportion of the five most common varieties is 100%.

In Slovenia, the breeding of indigenous domestic animals is becoming less attractive, and out of 15 indigenous breed 14 are endangered. The Carniolan honey bee being the only exception. Eleven out of 13 traditional breeds are also endangered. The share of introduced animal breeds and cross-breeds with introduced breeds has been increasing. The breeds and races where the adaptation to natural conditions is the strongest are the most successful with defying the introduced breeds.

Organic matter in soil is an important indicator of the quality of soil. In general, soil in Slovenia is well supplied with organic matter; this is evident from soil map data, which indicate that 86.2% of agricultural land contains more than 2% of organic matter, and 30.9% of land contains more than 4%. The results of laboratory analyses of soil samples taken in 2005 present a similar picture: 88.6% of samples contained more than 2% of organic matter and 37.3% of samples contained more than 4% or organic matter.

Land areas, prepared for irrigation, have increased from 4,554 ha to 6,414 ha in the period 2000-2024, and their share in total utilized agricultural area from 0.9% to 1.3%. The water consumption per hectare of irrigated land, which strongly depends on weather conditions in each year, has decreased since 2000. Slovenia belongs to the group of EU countries with the smallest share of utilized agricultural area ready for irrigation.

In the period 1992–2023 nitrogen surplus in Slovenian agriculture decreased. Trend analysis for this period shows that gross nitrogen surplus decreased on average by 1.4 kg N/ha per year or by 54%, and the net surplus by 1.2 kg N/ha per year or by 85%. The lower surplus was mainly due to a 43% increase in nitrogen removal by crops and a 6% decrease in nitrogen input per hectare of utilized agricultural area. A lower excess of nitrogen indicates better nitrogen management in agriculture and consequently a reduction in emissions of nitrogen compounds into the environment.

The main source of renewable energy from agriculture in Slovenia is the production of electricity from biogas. Electricity production from "agricultural" biogas plants included in the support scheme for electricity produced from RES increased from 0.04 kToe in 2004 to 10.67 kToe in 2011 and then fell to 5.18 kToe in 2024. The decline in electricity production in recent years is mainly due to the expiration of the right to support, which lasts for 15 years.

The phosphorus (P) budget in agriculture decreased by 109 % in the period 1992–2024. The decline is the result of a decreased P intake with mineral and livestock fertilizers, as well as the consequence of increased P uptake by agricultural crops. The period up to 2003 was characterized by a surplus of 11 to 16 kg per hectare. Thereafter, the surpluses decreased and reached an average value of +0.4 kg P per hectare in the last five-year period. A realistic comparison of the surplus with other EU Member States is not possible.